﻿<?xml version="1.0" encoding="utf-8"?><rss version="2.0"><channel><title>Labslink Research News</title><link>http://www.labslink.com</link><description>The latest research news from labslink.com.</description><copyright>Copyright 2009 Labslink.com. All rights reserved.</copyright><image><url>http://www.labslink.com/images/logo.gif</url><title>Labslink.com</title><link>http://www.labslink.com</link></image><item><title>Researchers discover novel mechanism protecting plants against freezing</title><description>New ground broken by Michigan State University biochemists helps  explain how plants protect themselves from freezing temperatures and  could lead to discoveries related to plant tolerance for drought and  other extreme conditions.
"This brings together two classic problems in plant biology," said  Christoph Benning, MSU professor of biochemistry and molecular biology.  "One is that plants protect themselves against freezing and that  scientists long thought it had something to do with cell membranes, but  didn't know exactly how.
"The other is the search for the gene for an enigmatic enzyme of  plant lipid metabolism in the chloroplasts," in other words, how lipids,  which are membrane building blocks, are made for the plant cell  organelles responsible for converting solar energy into chemical energy  by photosynthesis.
In an article published online this week by the journal &lt;em&gt;Science&lt;/em&gt;,  Benning and his then-doctoral degree candidate Eric Moellering and  technical assistant Bagyalakshmi Muthan describe how a particular gene  leads to the formation of a lipid that protects chloroplast and plant  cell membranes from freeze damage by a novel mechanism in &lt;em&gt;Arabidopsis thaliana&lt;/em&gt;, common mustard weed. Working on his dissertation project under Benning, Moellering identified a mutant strain of &lt;em&gt;Arabidopsis&lt;/em&gt; that can't manufacture the lipid and linked this biochemical defect to  work done by others who originally described the role of the gene in  freeze tolerance, but did not find the mechanism.
"One of the big problems in freezing tolerance or general stress in  plants is that some species are better at surviving stress than others,"  Moellering said. "We are only beginning to understand the mechanisms  that allow some plants to survive while others are sensitive."
There is no single mechanism involved in plant freezing tolerance,  Moellering added, so he can't say that his findings will lead any time  soon to genetic breakthroughs making citrus or other freezing-intolerant  plants able to thrive in northern climates. But it does add to our  understanding of how plants survive temperature extremes.
Much plant damage in freezing temperatures is due to cell  dehydration, in which water is drawn out as it crystallizes and the  organelle or cell membrane shrivels as liquid volume drops. Lipids in  the membranes of tolerant plants are removed and converted to oil that  accumulates in droplets, the researchers said, retaining membrane  integrity, keeping membranes from fusing with one another and conserving  the energy by storing oil droplets. With rising concern globally about  water supplies and climate change, scientists see additional reasons to  understand the ways hardy plants survive.
The research, funded by the U.S. Department of Energy Office of  Science Basic Energy Sciences and the Michigan Agricultural Experiment  Station, also leads to speculation that freezing itself can prompt cell  proteins directly to change the composition of the membrane, without  activation by gradual acclimation. That has been a major focus in the  plant freezing tolerance field, the researchers said.
"This opens a huge door now for people to do this kind of research,  and to redirect researchers," Benning said. "There are lots of them out  there trying to understand cold, salt and drought tolerance in plants,  and we've given them a new idea about how they can approach this problem  mechanistically."</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=5424</link><pubDate>Fri, 27 Aug 2010 03:21:09 PDT</pubDate></item><item><title>UK researchers release draft sequence coverage of wheat genome</title><description>A team of UK researchers, funded by the Biotechnology and Biological  Sciences Research Council (BBSRC), has publicly released the first  sequence coverage of the wheat genome. The release is a step towards a  fully annotated genome and makes a significant contribution to efforts  to support global food security and to increase the competitiveness of  UK farming.
The genome sequences released comprise five read-throughs of a  reference variety of wheat and give scientists and breeders access to  95% of all wheat genes. This is among the largest genome projects  undertaken, and the rapid public release of the data is expected to  accelerate significantly the use of the information by wheat breeding  companies.
The team involved Prof Neil Hall and Dr Anthony Hall at the  University of Liverpool, Prof Keith Edwards and Dr Gary Barker at the  University of Bristol and Prof Mike Bevan at the John Innes Centre, a  BBSRC-funded Institute.
Prof Edwards said: "The wheat genome is five times larger than the  human genome and presents a huge challenge for scientists. The genome  sequences are an important tool for researchers and for plant breeders  and by making the data publicly available we are ensuring this publicly  funded research has the widest possible impact."
Universities and Science Minister David Willetts said: "This is an  outstanding world class contribution by the UK to the global effort to  completely map the wheat genome. By using gene sequencing technology  developed in the UK we now have the capability to improve the crops of  the future by simply accelerating the natural breeding process to select  varieties that can thrive in challenging conditions."
The genome data released are in a 'raw' format, comprising sequence  reads of the wheat genome in the form of letters representing the  genetic 'code'. A complete copy of the genome requires further  read-throughs, significant work on annotation and the assembly of the  data into chromosomes. Large-scale, rapid sequencing programmes such as  this have been made technically feasible by advanced technology genome  sequencing platforms, including one based on BBSRC-funded research  conducted in the UK in the 1990s.The majority of the sequencing work for  this particular project was done using the 454 Life Science platform,  developed in the US.
Prof Hall said: "The genome sequence data of this reference variety,  Chinese Spring wheat, will now allow us to probe differences between  varieties with different characteristics. By understanding the genetic  differences between varieties with different traits we can start to  develop new types of wheat better able to cope with drought, salinity or  able to deliver higher yields. This will help to protect our food  security while giving UK plant breeders and farmers a competitive  advantage."
The sequence data can be used by scientists and plant breeders to  develop new varieties through accelerated conventional breeding or other  technologies.
Prof Bevan, a member of the Coordinating Committee of the  International Wheat Genome Sequencing Consortium, said: "The sequence  coverage will provide an important foundation for international efforts  aimed at generating a complete genome sequence of wheat in the next few  years."
Prof Doug Kell, BBSRC Chief Executive, said: "Recent short-term  price spikes in the wheat markets have shown how vulnerable our food  system is to shocks and potential shortages. The best way to support our  food security is by using modern research strategies to understand how  we can deliver sustainable increases in crop yields, especially in the  face of climate change. Genome sequencing of this type is an absolutely  crucial strategy, building on previous BBSRC-funded work. Knowledge of  these genome sequences will now allow plant breeders to identify the  best genetic sequences to use as markers in accelerated breeding  programmes."
Dr Jane Rogers, Member of the Coordinating Committee of the  International Wheat Genome Sequencing Consortium and Director of BBSRC's  The Genome Analysis Centre, said: "The public release of the wheat  genome data will be a useful resource for scientists and the plant  breeding community and will provide a foundation to identify genetic  differences between wheat varieties. In recent years genomics technology  has advanced to a point that scientists can now produce sequence data  for plants with genomes as large as wheat at a rate unimaginable a few  years ago. This is an impressive achievement, notwithstanding the  significant hurdles we still face to fully interpret and understand the  data."
A key feature of this research has been the quick release of the  data into the public domain to allow other scientists and wheat breeding  companies to rapidly employ it in practical applications. Richard  Summers, Vice Chairman of the British Society of Plant Breeders, said:  "The wheat breeding community has been greatly impressed with the  collaborative approach taken in this project. The team brought together  world class skills in sequencing and wheat genetics to deal with a major  barrier in wheat breeding. This is an excellent example of how to  achieve technology transfer from research lab through to practical  deployment."</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=5421</link><pubDate>Fri, 27 Aug 2010 03:16:47 PDT</pubDate></item><item><title>Electrifying findings: New ways of boosting healthful antioxidant levels in potatoes</title><description>Here's a scientific discovery fit to give Mr. Potato Head static  cling and flyaway hair (if that vintage plastic toy had hair).  Scientists today reported discovery of two simple, inexpensive ways of  boosting the amounts of healthful antioxidant substances in potatoes.   One involves giving spuds an electric shock. The other involves zapping  them with ultrasound, high frequency sound waves.
Those new insights into improving the nutritional content of one of  the Western world's favorite side dishes were reported today at the  240th National Meeting of the American Chemical Society (ACS), being  held here this week. The study was among nearly 8,000 scientific reports  scheduled for presentation at the meeting, one of the largest  scientific gatherings of 2010.
"We found that treating the potatoes with ultrasound or electricity  for 5-30 minutes increased the amounts of antioxidants &amp;ndash;&amp;ndash; including  phenols and chlorogenic acid &amp;ndash;&amp;ndash; by as much as 50 percent," said Kazunori  Hironaka, Ph.D., who headed the research. "Antioxidants found in fruits  and vegetables are considered to be of nutritional importance in the  prevention of chronic diseases, such as cardiovascular disease, various  cancers, diabetes, and neurological diseases."
Hironaka, who is with Obihiro University in Hokkaido, Japan,  indicated that the process could have widespread commercial application,  due to growing consumer interest in so-called  "functional foods."   Those are products like berries, nuts, chocolate, soy, and wine that may  have health benefits beyond traditional nutrition. Such foods may  promote overall good health, for instance, or reduce the risk of  specific diseases. Hironaka estimated that sales of such products in the  United States alone now approach $20 billion annually.
"We knew from research done in the past that drought, bruising, and  other stresses could stimulate the accumulation of beneficial phenolic  compounds in fresh produce," Hironaka explained.  "We found that there  hasn't been any research on the healthful effects of using mechanical  processes to stress vegetables. So we decided in this study to evaluate  effect of ultrasound and electric treatments on polyphenols and other  antioxidants in potatoes."
The ultrasound treatment consisted of immersing whole potatoes in  water and subjecting them to ultrasound for 5 or 10 minutes. For the  electrical treatment, the scientists immersed potatoes in a salt  solution for 10 seconds and subsequently treated the spuds with a small  electrical charge for 10, 20, and 30 minutes. The study team then  measured antioxidant activity and the phenolic content and concluded  that the stresses increased the amount of these compounds.  The 5  minutes of ultrasound, for instance, increased polyphenol levels by 1.2  times and other antioxidants by about 1.6 times.</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=5377</link><pubDate>Mon, 23 Aug 2010 03:11:10 PDT</pubDate></item><item><title>New genetic tool helps improve rice</title><description>U.S. Department of Agriculture (USDA) scientists have developed a new tool for improving the  expression of desirable genes in rice in parts of the plant where the  results will do the most good.
Roger Thilmony, a geneticist with USDA's Agricultural Research Service (ARS), has shown that the &lt;em&gt;LP2&lt;/em&gt; gene promoter can be used to direct other introduced genes to express  beneficial traits in specific plant tissues without the potential for  causing unintended consequences. Thilmony works at the ARS Crop Improvement and Utilization Research Unit in Albany, Calif. ARS is USDA's principal intramural scientific research agency.
Rice is under constant threat from pathogens such as rice blast, a  fungus found in fields worldwide, and sheath blight, a continuing threat  to U.S. growers. Scientists who develop disease-resistant varieties  often find that introducing a gene may prevent disease in one part of  the plant, but also may reduce seed quality or produce other "side  effects" because the gene is expressed throughout the plant.  Tissue-specific promoters, such as &lt;em&gt;LP2&lt;/em&gt;, are segments of genes  that can direct the activity of introduced genes only to parts of the  plant where the beneficial traits are needed.
Thilmony and his ARS colleagues Mara Guttman, James Thomson and Ann Blechl found that the gene they named &lt;em&gt;LP2&lt;/em&gt; is consistently expressed in green tissues. In experiments, they fused the &lt;em&gt;LP2&lt;/em&gt; promoter with a "reporter gene" known to produce a specific enzyme, and  inserted that fused DNA package into seven lines of rice to see where  the enzyme would be produced.
They found that the &lt;em&gt;LP2&lt;/em&gt; promoter steered expression of the  reporter gene specifically to green tissues where photosynthesis occurs.  The reporter gene enzyme activity was highest in the leaves, and nearly  undetectable in the roots, seeds and flower parts.
The &lt;em&gt;LP2&lt;/em&gt; promoter could be used to improve varieties of rice,  barley and wheat and could aid in the development of biofuel crops, in  which scientists need to control leaf traits without affecting other  tissues, according to Thilmony.
The researchers published their work in &lt;em&gt;Plant Biotechnology Journal&lt;/em&gt; and have filed a provisional patent on use of the &lt;em&gt;LP2&lt;/em&gt; promoter.
This research supports the USDA priority of promoting international food security.</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=5358</link><pubDate>Fri, 20 Aug 2010 03:25:45 PDT</pubDate></item><item><title>Plant 'breathing' mechanism discovered</title><description>A tiny, little-understood plant pore has enormous implications for  weather forecasting, climate change, agriculture, hydrology, and more. A  study by scientists at the Carnegie Institution's Department of Global  Ecology, with colleagues from the Research Center J&amp;uuml;lich in Germany, has  now overturned the conventional belief about how these important  structures called stomata regulate water vapor loss from the leaf&amp;ndash;a  process called transpiration. They found that radiation is the driving  force of physical processes deep within the leaf. The research is  published the week of July 12, 2010, in the on-line early edition of the  &lt;em&gt;Proceedings of the National Academy of Sciences&lt;/em&gt;.
Stomata are lip-shaped pores surrounded by a pair of guard cells  that control the size of the opening. The size of the pores regulates  the inflow of carbon dioxide (CO&lt;sub&gt;2&lt;/sub&gt; ) needed for photosynthesis  and the outflow of water vapor to the atmosphere&amp;mdash;transpiration.
Transpiration cools and humidifies the atmosphere over vegetation,  moderating the climate and increasing precipitation. Stomata influence  the rate at which plants can absorb CO&lt;sub&gt;2&lt;/sub&gt; from the atmosphere,  which affects the productivity of plants and the concentration of  atmospheric CO&lt;sub&gt;2&lt;/sub&gt;. Understanding stoma is important for climate  change research.
Current climate change models use descriptions of stomatal response  based on statistical analysis of studies conducted with a few plant  species. This approach is not based on a solid understanding of the  mechanism of stomatal regulation and provides a poor basis for  extrapolating to environmental conditions.
"Scientists have been studying stomata for at least 300 years. It's  amazing that we have not had good grasp about the regulatory mechanisms  that control how much stomata open or close in response to a constantly  changing environment," remarked co-author Joseph Berry of Carnegie.
For the first time, these researchers looked at how the exchange of  energy and water vapor at the outer surface of the leaf are linked to  processes inside the leaf. They found that the energy from radiation  absorbed by pigments and water inside the leaf influences how the  stomata control water levels.
"In this study we illuminated a sunflower leaf with an incandescent  light that was filtered to include or exclude near infrared light (NIR  &amp;gt;700 nm)," remarked Berry. "When the near infrared light was applied,  the stomata responded by opening and indirectly stimulated  photosynthesis. Light of different colors gave similar stomata opening  at equal energy inputs&amp;mdash;more evidence that heat is the driver."
The scientists replicated the experiment with five other plant  species and over a range of carbon dioxide levels and temperatures. The  researchers also developed a model based on energy balance of the leaf  system to simulate responses. Results from the model mimicked the  results from the lab.
It has been assumed that the guard cells forming the pore have  sophisticated sensory and information processing systems making use of  light and other environmental cues to adjust the pores. The breakthrough  of this research is that it is the first to demonstrate that regulation  of the rate of water loss by stomata is linked to physical processes  that occur deep within the leaf.
"This means that the current model for what drives stomata to change  their size has to change," remarked co-author Roland Pieruschka, a  Marie Curie Fellow from the European Union at the Carnegie Institution  (currently at the Research Center J&amp;uuml;lich in Germany). "For a long time  researchers have thought that heat from the sun, which is absorbed by  pigments, moves from cell to cell until it gets to the cavities beneath  the stomata where evaporation has been thought to take place. This  probably happens to some degree, but the results presented here are more  consistent with our hypothesis that much of this heat is transferred  through air spaces inside the leaf that are saturated with water vapor.  This key difference is pivotal for understanding how Otto Lange's  seminal work in the 1970s, on responses of stomata to humidity, can be  fit into a leaf-scale concept of stomatal regulation."</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4989</link><pubDate>Tue, 13 Jul 2010 03:17:05 PDT</pubDate></item><item><title>Thousands of undiscovered plant species face extinction</title><description>Faced with threats such as habitat loss and climate change, thousands  of rare flowering plant species worldwide may become extinct before  scientists can even discover them, according to a paper published today  by a trio of American and British researchers in the journal &lt;em&gt;Proceedings  of the Royal Society B&lt;/em&gt;.
"Scientists have estimated that, overall, there could be between 5  million and 50 million species, but fewer than 2 million of these  species have been discovered to date," says lead author Lucas Joppa of  Microsoft Research in Cambridge, U.K., who received his doctorate from  Duke University earlier this year. "Using novel methods, we were able to  refine the estimate of total species for flowering plants, and  calculate how many of those remain undiscovered."
Based on data from the online World Checklist of Selected Plant  Families at the Royal Botanic Gardens, Kew, the scientists calculated  that there are between 10 and 20 percent more undiscovered flowering  plant species than previously estimated. This finding has "enormous  conservation implications, as any as-yet-unknown species are likely to  be overwhelmingly rare and threatened," Joppa says.
The new, more accurate estimate can be used to infer the proportion  of all threatened species, says coauthor David Roberts of the Durrell  Institute of Conservation and Ecology at the University of Kent. "If we  take the number of species that are currently known to be threatened,  and add to that those that are yet to be discovered, we can estimate  that between 27 percent and 33 percent of all flowering plants will be  threatened with extinction," he says.
"That percentage reflects the global impact of factors such as  habitat loss. It may increase if you factor in other threats such as  climate change," Joppa adds.
"The timing couldn't be more perfect," says co-author Stuart Pimm,  Doris Duke Professor of Conservation Ecology at Duke's Nicholas School  of the Environment. "The year 2010 is the International Year of  Biodiversity. We wrote the paper to help answer the obvious questions:  How much biodiversity is out there, and how many species will we lose  before they are even discovered?"
&amp;nbsp;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4936</link><pubDate>Thu, 08 Jul 2010 03:18:16 PDT</pubDate></item><item><title>UK geneticists shed light on flowering plants</title><description>A team of researchers from Warwick have isolated a gene responsible  for regulating the expression of CONSTANS, an important inducer of  flowering, in &lt;em&gt;Arabidopsis&lt;/em&gt;.
'Being able to understand and ultimately control seasonal flowering  will enable more predictable flowering, better scheduling and reduced  wastage of crops', explained Dr Jackson.
Whilst the relationship between CONSTANS and flowering time in  response to day length is well established, the mechanism controlling  the expression of CONSTANS is still not fully understood.
The scientists present their work at the Society for Experimental  Biology Annual Meeting in Prague on Wednesday 30th June 2010.
Many plants control when they flower to coincide with particular  seasons by responding to the length of the day, a process known as  photoperiodism. A flowering mutant of &lt;em&gt;Arabidopsis&lt;/em&gt;, which had an  altered response to photoperiod, was used in the study led by Dr Stephen  Jackson.
In the study funded by the BBSRC, the team identified the defective  gene in the mutant plant that caused its abnormal flowering time.
They then cloned a working version of the gene, known as DAY NEUTRAL  FLOWERING (DNF), from a normal &lt;em&gt;Arabidopsis&lt;/em&gt; plant and introduced  it into the mutant plant to restore its normal flowering response to day  length.
The role of DNF in normal plant flowering is to regulate the  CONSTANS gene. CONSTANS is activated only in the light and the plant is  triggered to flower when CONSTANS levels rise above a certain threshold  level during the daytime.
In normal plants, DNF represses the levels of CONSTANS until the day  length is long enough and conditions are favourable for the survival of  their seedlings. In mutant plants without an active DNF gene, CONSTANS  is not repressed and they are able to flower earlier in the year, when  days are still short.
The presence of the DNF gene has not yet been identified in species  other than &lt;em&gt;Arabidopsis&lt;/em&gt; but the scientists believe their on-going  work may prove to have a wider significance for other species.
Scientists can override complex pathways that control flowering by  artificially inducing or inhibiting key flowering genes such as DNF and  CONSTANS. This can already be done in the laboratory by spraying an  'inducing agent' onto plants, stimulating them to flower early.
This could be used to extend the length of the harvesting season or  to co-ordinate flowering or fruit production to a specific time. Growers  already regulate the flowering of a few plants such as Chrysanthemum  and Poinsettia, the latter specifically for Christmas and Easter.
Unravelling the complex pathways that control plant flowering will  help scientists to understand and influence flowering patterns more  effectively and in many different species.</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4847</link><pubDate>Wed, 30 Jun 2010 03:18:26 PDT</pubDate></item><item><title>Gender-bending fish problem in Colorado creek mitigated by treatment plant upgrade</title><description>Male fish are taking longer to be "feminized" by chemical  contaminants that act as hormone disrupters in Colorado's Boulder Creek  following the upgrade of a wastewater treatment plant in Boulder in  2008, according to a new study led by the University of Colorado at  Boulder.
But the problem of fish feminization -- which causes males to  develop characteristics of females and to decline in numbers -- is a  global one that is growing as a result of increasing chemicals like  natural human reproductive steroids, pharmaceuticals, cosmetics,  shampoos and soaps making their way into waterways, said CU-Boulder  Professor David Norris, who led the study.
Norris, a professor of integrative physiology at CU-Boulder, said  the multimillion-dollar general upgrade of the Boulder Wastewater  Treatment plant northeast of Boulder, Colo., designed to solve multiple  problems has had a dramatic effect on delaying symptoms of male fish  feminization.  The team compared fish populations below the wastewater  treatment plant on Boulder Creek in 2006 before it had upgraded and  again after the upgrade had been completed.
Norris participated in a press briefing at the Endocrine Society's  92nd annual meeting held June 19-22 in San Diego.  Other team members  included Alan Vajda of the University of Colorado Denver, Ashley Bolden  and John Woodling of CU-Boulder, Larry Barber of the U.S. Geological  Survey's Water Resource Division in Boulder and Heiko Schoenfuss of St.  Cloud University in Minnesota.
In the 2006 study Norris and his colleagues used a mobile fish  exposure facility situated on Boulder Creek northeast of Boulder that  collected both water from upstream of the plant and effluent water  directly from the treatment plant.  After exposure to equal parts of  effluent and upstream water for only seven days, adult male fathead  minnows became feminized, looking and acting like females and showing  elevated levels of a protein known as vitellogenin that is normally  produced by females.
Contaminants identified in Boulder Creek included ethinylestradiol  -- a chemical used in most contraceptives -- as well as other  reproductive steroids produced naturally by humans. Estrogen-related  chemicals found in the water included bisphenyl A and phthalates  associated with plastic, nonylphenols associated with detergents, and  pesticides.  Most of the compounds came from products flushed down  toilets and drains, according to Norris.
In the new study following the treatment plant upgrade, the team  studied adult male fathead minnows in 100 percent effluent water, those  in a mixture of half effluent and half upstream water, and those in  tanks containing all upstream water.  Norris and his team saw no effects  on male sex characteristics of the minnows in the tank containing 100  percent effluent water directly from the treatment plant until 28 days  after exposure.
As part of the study, Norris and his colleagues also analyzed  reproductive organs from preserved fish specimens from CU's Museum of  Natural History that had been collected from Boulder Creek between 50  and 100 years ago.  The researchers and found no evidence of feminized  or intersex fish in the museum specimens, he said.
The CU research team also tested brown trout populations below a  wastewater treatment in Vail, Colo., said Norris.  The trout showed no  increases in vitellogenin.
In addition to chemicals that trigger fish feminization, biologists  are finding increased concentrations of fluoxetine, a common  antidepressant taken by millions of Americans, in waterways across the  nation, said Norris. Fluoxetine has been shown to enter the brains of  fish and affect fish behavior, said Norris.
Between 2000 and 2002, Norris and his group were among the first in  the nation to document the problem of intersex fish following their  stream surveys of Boulder Creek, the South Platte River near Denver and  Fountain Creek near Colorado Springs in 2000.  The researchers found  feminized fish at all of the sites and as well as skewed sex ratios  showing there were more females than males. Since that time biologists  have been reporting feminized male fish and intersex fish in waterways  across the globe.
"I look at the problem of fish feminization in waterways as a canary  in a mine shaft," said Norris. "This is not the problem of water  treatment plants, it's our problem as human beings. We excrete natural  and synthetic estrogens and use shampoos, detergents and cosmetics  containing a variety of hormone disrupters that wind up in waterways.  All of these different chemicals we are putting into the environment  have the potential to alter the biology of animals and to affect  ecosystems."
It boils down to a growing human population problem, he said.  Ways  to mitigate effects of chemicals include using reduced amounts of  detergents and shampoos.  Another way people can lessen the problem is  to avoid antibacterial soaps, which can disrupt thyroid function in  fish.
"People have shown they can consciously mitigate some of these  issues," said Norris.  "One example is the refusal of some to buy milk  from cattle that contain growth hormones."
He said the bulk of all pharmaceuticals people ingest generally wind  up in urine and feces within 24 hours and are flushed or drained into  treatment plants.  In addition, chemicals from plastics and canned food  can pass through humans and travel into waterways, affecting fish  populations as well as the health of people. "Our bodies are being  exposed every day to a variety of chemicals capable of altering our  physiological development, including impacts on sensitive human  fetuses."</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4753</link><pubDate>Tue, 22 Jun 2010 03:39:10 PDT</pubDate></item><item><title>New evidence that smokeless tobacco damages DNA and key enzymes</title><description>Far from having adverse effects limited to the mouth, smokeless  tobacco affects the normal function of a key family of enzymes found in  almost every organ in the body, according to the first report on the  topic in ACS' monthly journal &lt;em&gt;Chemical Research in Toxicology&lt;/em&gt;.  The enzymes play important roles in production of hormones, including  the sex hormones estrogen and testosterone; production of cholesterol  and vitamin D; and help the body breakdown prescription drugs and  potentially toxic substances. Smokeless tobacco also damages genetic  material in the liver, kidney and lungs.
Krishan Khanduja and colleagues note widespread recognition of  smokeless tobacco's harmful effects on the mouth, which include an  increased risk of gum disease and oral cancer. The potential carcinogens  and other chemicals in chewing tobacco and other smokeless products are  absorbed into the blood and travel throughout the body. However,  scientists have little information on smokeless tobacco's effects on  other parts of the body. To fill that knowledge gap, the scientists  evaluated changes in enzymes and genetic material in laboratory rats  using extracts of smokeless tobacco.
In addition to damage to the genetic material DNA, they found that  smokeless tobacco extracts alter the function of the so-called CYP-450  family of enzymes. "These products are used around the world but are  most common in Northern Africa, Southeast Asia, and the Mediterranean  region," the report says. "Most of the users seem to be unaware of the  harmful health effects and, therefore, use smokeless tobacco to 'treat'  toothaches, headaches, and stomachaches. This false impression only  promotes tobacco use among youth. The use of smokeless tobacco and its  new products is increasing not only among men but also among children,  teenagers, women, and immigrants of South Asian origin and medical and  dental students."</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4697</link><pubDate>Thu, 17 Jun 2010 03:41:24 PDT</pubDate></item><item><title>Wild potato germplasm holds key to disease resistance</title><description>Wild potato germplasm that offers resistance to some major potato  diseases has been identified by Agricultural Research  Service (ARS) scientists.
Geneticists Dennis  Halterman and Shelley  Jansky pinpointed the resistant wild potato species in studies at  the ARS Vegetable  Crops Research Unit in Madison, Wis.
Halterman has identified a wild potato species called &lt;em&gt;Solanum  verrucosum&lt;/em&gt; that contains a gene with resistance to late blight,  considered the most destructive disease of potato.  The wild species can  be crossed with cultivated potatoes, and efforts are under way to move  the late-blight resistance gene into the cultivated potato gene pool.
But the scientists aren&amp;rsquo;t stopping there. They are using &lt;em&gt;S.  verrucosum&lt;/em&gt; to create a potato that&amp;rsquo;s resistant to both late blight  and early blight, a fungal disease that primarily affects the potato  plant&amp;rsquo;s leaves and stems but, if left uncontrolled, can lead to  considerable reductions in yields.
To create the multi-disease-resistant cultivar, the scientists  crossed &lt;em&gt;S. verrucosum&lt;/em&gt; with another wild potato species that is  resistant to early blight, and then crossed the wild potato hybrid with  the cultivated potato. They currently have seedlings in the greenhouse  waiting to be tested in the field.
Halterman and Jansky are also looking for resistance to Verticillium  wilt, another fungal disease that can linger in the soil for up to 10  years. Halterman developed a molecular marker to screen potato germplasm  for resistance against this disease, saving the scientists time and  effort. They found resistance in the wild potato species &lt;em&gt;S.  chacoense&lt;/em&gt; and crossed it with the cultivated potato. According to  Halterman, this could be a good, durable gene that may hold up over the  long term.</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4690</link><pubDate>Thu, 17 Jun 2010 03:28:22 PDT</pubDate></item><item><title>High yield crops keep carbon emissions low</title><description>The Green Revolution of the late 20th century increased crop yields  worldwide and helped feed an expanding global population. According to a  new report published in the &lt;em&gt;Proceedings of the National Academy of  Sciences,&lt;/em&gt; it also has helped keep greenhouse gas emissions at bay.  The researchers estimate that since 1961 higher yields per acre have  avoided the release of nearly 600 billion tons of carbon dioxide to the  atmosphere.
"That's about 20 years of fossil fuel burning at present rates,"  says study co-author Steven Davis of the Carnegie Institution's  Department of Global Ecology. "Our results dispel the notion that  industrial agricultural with its petrochemicals are inherently worse for  the climate than a more 'old-fashioned' way of doing things."
Agriculture is a major source of greenhouse gases. The high-yield  crop varieties developed during the Green Revolution produced a bounty  of food, but they also increased agriculture's reliance on pesticides,  fertilizers, and mechanization.  The research team, which also included  lead author Jennifer Burney and David Lobell of Stanford University,  investigated the net effect of Green Revolution crops on greenhouse gas  emissions during the period between 1961 and 2005.
They found that although the various inputs to modern farms require  more energy and greenhouse gas  emissions per unit of food output than  did the lower-input methods of the past, crop yields have increased by  135%, reducing the amount of cropland needed to produce the same amount  of food. Without these advances, the conversion of vast natural areas to  agriculture would have caused much more greenhouse gas emissions&amp;mdash;the  equivalent of nearly 600 billion tons of CO2 since 1961.
"Converting a forest or some scrubland to an agricultural area  causes a lot of natural carbon in that ecosystem to be oxidized and lost  to the atmosphere" says Davis ."What our study shows is that these  indirect impacts from converting land to agriculture outweigh the direct  emissions that come from the modern, intensive style of agriculture."
The researchers also calculated the benefits of investing in  agricultural research as a strategy for reducing greenhouse gas  emissions. They estimate that since 1961 agricultural research has  averted carbon dioxide emissions at a cost of about $4 per ton of CO2.  The potential for emissions reduction compares favorably with other  strategies.  Agricultural advances have prevented about 13 billion tons  of carbon dioxide emissions each year, much more than the estimated 1.8  billion tons obtainable by improvements in energy supply or the  estimated 1.7 billion from improved transportation systems.
"Agricultural research is one of the cheapest ways of preventing  greenhouse gas emissions," says Davis. "And if the past few decades are  a guide, it is also a large source of potential reduction."</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4659</link><pubDate>Tue, 15 Jun 2010 03:22:35 PDT</pubDate></item><item><title>Collagen manufactured from transgenic tobacco plants at Hebrew University</title><description>A scientist at the Hebrew University of Jerusalem's Robert H. Smith  Faculty of Agriculture, Food and Environment has succeeded in producing a  replica of human collagen from tobacco plants &amp;ndash; an achievement with  tremendous commercial implications for use in a variety of human medical  procedures.
Natural human type I collagen is the most abundant protein in the  human body and is the main protein found in all connective tissue.  Commercially produced collagen (pro-collagen) is used in surgical  implants and many wound healing devices in regenerative medicine. The  current market for collagen-based medical devices in orthopedics and  wound healing exceeds US $30 billion annually worldwide.
Currently, commercial collagen is produced from farm animals such as  cows and pigs as well as from human cadavers. These materials are prone  to harbor human pathogens such as viruses or prions (mad-cow disease).  Human cadaver is scarce, and for certain indications possesses serious  ethical issues.
Producing human recombinant type I pro-collagen requires the  coordinated expression of five different genes. Prof. Oded Shoseyov of  the Robert H. Smith Institute of Plant Sciences and Genetics in  Agriculture has established the only laboratory in the world that has  reported successful co-expression all the five essential genes in  transgenic tobacco plants for the production of processed pro-collagen.  For this work, Shoseyov was one of the recipients of a Kaye Innovation  Award during the Hebrew University Board of Governors meeting in June.
Shoseyov's invention on has been patented, and the scientific  findings behind it were published recently in the journal &lt;em&gt;Biomacromolecules&lt;/em&gt;.  A company, CollPlant Ltd., has been established based on patents and  technology that were developed in Shoseyov's laboratory. It has raised  US$15 million to establish the first commercial molecular farming  company in Israel and is already manufacturing  collagen-based products  that have attracted collaborative commercial interest from companies in  the US, Japan Europe and Israel.
Yissum, the technology transfer company of the Hebrew University, is  one of the shareholders of CollPlant.. CollPlant is a public company  traded in "TASE", and the potential revenue for the Hebrew University  from this invention is estimated to reach into the multi-million dollar  range.
The Kaye Awards have been given annually since 1994. Isaac Kaye of  England, a prominent industrialist in the pharmaceutical industry,  established the awards to encourage faculty, staff, and students of the  Hebrew University to develop innovative methods and inventions with good  commercial potential which will benefit the university and society.</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4626</link><pubDate>Fri, 11 Jun 2010 03:40:29 PDT</pubDate></item><item><title>With fungi on their side, rice plants grow to be big</title><description>By tinkering with a type of fungus that lives in association with  plant roots, researchers have found a way to increase the growth of rice  by an impressive margin. The so-called mycorrhizal fungi are found in  association with nearly all plants in nature, where they deliver  essential nutrients&amp;mdash;specifically phosphate&amp;mdash;to plants in return for  sugar. The findings are nevertheless a surprise, according to  researchers reporting online on June 10th in &lt;em&gt;Current Biology&lt;/em&gt;, a  Cell Press publication, because there has been little evidence thus far  to suggest that crop plants actually respond to the fungi.
"Global reserves of phosphate are critically low, and because the  demand for phosphate goes hand in hand with human population expansion,  it is predicted that there will be major shortages in the next few  decades," said Ian Sanders of the University of Lausanne in Switzerland.  "Unfortunately, most of our important crop plants do not respond  strongly, if at all, to inoculation with these fungi. This is especially  so for rice, the most globally important food plant. There are no clear  reports that rice benefits from inoculation with mycorrhizal fungi."
That is, until now. In fact, the researchers started with a strain  of mycorrhizal fungus of the species Glomus intraradices that clearly  didn't benefit rice. They then took advantage of the fungus's unusual  genetics. A single fungal filament can contain genetically distinct  nuclei. Those distinct nuclei can fuse together, mixing genes up in  different combinations, and fungal spores can also end up with different  complements of genes, the new research shows. As such, the supposedly  clonal fungi maintain a degree of genetic variation that had been  overlooked.
"It turns out we can very simply manipulate their genetics to  produce fungi that induce up to a five-fold growth increase in this  globally important food plant," Sanders said.
The genetic changes that the researchers produced in the fungi led  to changes in the activity of important genes in the rice, they report.  Those affected genes are known to be involved in establishing the  mutually beneficial relationship between plant and fungus and in the  transport of phosphate at the interface between fungus and plant.
Sanders emphasized that the genetic manipulation the researchers  undertook didn't involve any insertion of new genes into the fungal  genome. It rather relied on the same biological processes of genetic  exchange and segregation that normally take place in the fungus. "What  we have done with these fungi is not much different from what plant  breeders, and farmers before them, have done to improve crops," he said.  "The only difference is that the genetics of these fungi is a little  bit more unusual, and no one thought it worth doing."
On a cautionary note, Sanders did emphasize that the plants they  studied were grown in a greenhouse in Switzerland under conditions that  only mimicked those found in the tropics. "This is clearly not at all  the same environment as a rice plant growing in a real paddy field," he  said. It remains to be seen whether the same growth benefits will apply  in practice.
"However," Sanders said, "our study clearly shows that the potential  is there to manipulate the genetics of the fungus to achieve greater  crop yields."</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4620</link><pubDate>Fri, 11 Jun 2010 03:27:23 PDT</pubDate></item><item><title>New rust resistance genes added to common beans</title><description>New cultivars of common bean developed by Agricultural Research  Service (ARS) and university scientists could shore up the legume crop's  defenses against the fungal disease common bean rust.
According to Talo Pastor-Corrales, an ARS plant pathologist in  Beltsville, Md., the new cultivars possess two or more genes for  resistance to the rust fungi. Most of the cultivars also harbor Ur-11,  which is considered the most effective rust-resistance gene in the  world.
Pastor-Corrales and his colleagues at the University of Nebraska and  Colorado State University resorted to this multi-gene strategy in  response to the high diversity of strains of the bean rust pathogen.  Lately, virulent new races of rust that have overcome the Ur-3  resistance gene appeared in Michigan and North Dakota.
Until recently, this gene had been very effective in controlling  rust in the United States, epecially  in North Dakota and Michigan, the  country's largest bean-growing states. Now, Ur-3-protected varieties  that once withstood the disease are succumbing to it, and there's  concern the new races will spread to other Northern Plains states where  common beans are grown, such as Colorado and Nebraska.
Pastor-Corrales' search for novel sources of rust resistance in  dry-, snap-  and other common beans has taken him to 21 countries in the  Americas and 11 in Africa. The battle against rust is complicated by  the fact that races present in crop fields can vary from one year to the  next, adds Pastor-Corrales, who leads a bean breeding project at the  ARS Soybean Genomics and Improvement Research Unit in Beltsville.</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4537</link><pubDate>Sat, 05 Jun 2010 03:18:08 PDT</pubDate></item><item><title>The dilemma of plants fighting infections</title><description>Individuals of one and the same plant species often differ greatly in  their ability to resist pathogens: While one rose succumbs to bacterial  infection, its neighbour blissfully thrives. Scientists from the Max  Planck Institute of Developmental Biology in Germany have tracked down  an explanation for this common phenomenon. Their conclusion: disease  resistance can incur high costs. Especially resistant plants of mouse  ear cress (Arabidopsis thaliana) produce fewer and smaller leaves, and  have a competitive disadvantage in the absence of enemies. Whether it is  better to invest in disease resistance or biomass is thus very much  dependent on the unpredictable circumstances a plant may find itself in.  Therefore both large, but vulnerable plants co-exist in nature with  small, but well-protected ones (Nature, June 3rd 2010).
&lt;span class="tx"&gt;In the course of evolution, plants have invented many  ways to defend themselves against enemies. Some produce smelly or  bad-tasting ingredients, others develop thorns or have a particular  effective immune response to viruses and bacteria. If selection pressure  is sufficiently high, one would thus expect only those individuals to  survive that are best protected. Pathogens, in turn, should have a  difficult time. Everybody knows that this is not the case. Indeed,  plants vary tremendously in their ability to defend themselves, and this  is true not only for different species, but also for members of the  same species........&amp;gt;&lt;a href="http://www.mpg.de/english/illustrationsDocumentation/documentation/pressReleases/2010/pressRelease20100527/presselogin/" target="_blank"&gt; Full story &lt;/a&gt;&lt;/span&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4512</link><pubDate>Thu, 03 Jun 2010 03:27:30 PDT</pubDate></item><item><title>Genome of bacteria responsible for tuberculosis of olive tree sequenced</title><description>Researchers at the Public University of Navarra, the Polytechnic  University of Madrid (CBGP), the University of Malaga, the University of  Wisconsin and the Valencian Institute of Agricultural Research have  managed to sequence the genome of the bacteria responsible for  tuberculosis in the olive tree. The study, included in the June issue of  &lt;em&gt;Environmental Microbiology&lt;/em&gt;, represents the first sequencing of  the genome of a pathogenic bacteria undertaken in Spain, being the  first genome known worldwide of a pathogenic &lt;em&gt;Pseudomonas &lt;/em&gt;in  woody plants.
The sequencing of the genome of this pathogen opens the doors to the  identification of the genes responsible for the virulence of this  bacteria and its survival on the philosphere (leaf surface), thus  facilitating the design of specific strategies in the fight against the  disease and enabling drawing up programmes for the genetic improvement  of olive groves.
&lt;em&gt;Pseudomonas savastanoi&lt;/em&gt; is the agent that gives rise to  tuberculosis in the olive tree, a disease that causes important losses  in the olive crops in Spain. Trees affected present tumours (known as  verrucas) that can grow to several centimetres diameter in trunks,  branches, stalks and buds. Diseased trees are less robust and have less  growth, to the point of being non-productive if the attack is very  intense. To date, due to the absence of effective methods of control,  preventive strategies have been carried out, reducing populations of  bacteria with phytosanitary treatment.
&lt;h4&gt;New strategies&lt;/h4&gt;
Plant diseases produced by pathogenic microorganisms not only reduce  production but can also alter the quality of the food and drastically  diminish the commercial value of the crops. The new strategies for  disease control today involve the analysis of information contained in  the genome of pathogenic organisms. Similar to what has happened with  the human genome, this technology is generating a great amount of  valuable information for the development of innovative technologies,  that will enable identifying and controlling the pathogen as well as  obtaining new varieties of the host plant that have greater resistance  to the disease.
&lt;a href="http://www.basqueresearch.com/berria_irakurri.asp?Berri_Kod=2757&amp;amp;hizk=I" target="_blank"&gt;Source&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4495</link><pubDate>Wed, 02 Jun 2010 03:38:49 PDT</pubDate></item><item><title>Rosewood trees face extinction amid Madagascar's chaos</title><description>Political and social chaos and a lack of international protections  have put several species of rosewood trees in Madagascar in danger of  becoming extinct from illegal logging, according to a policy forum paper  in the latest issue of &lt;em&gt;Science&lt;/em&gt;.
"Forty-seven of Madagascar's 48 species of rosewood (&lt;em&gt;Dalbergia&lt;/em&gt;)  are found nowhere else in the world," said Duke University graduate  student Meredith Barrett, the lead author on the May 27 article.
Madagascar's military-backed change in leadership last year and a  lucrative rosewood market based largely in China have created a  dangerous situation for the endangered trees and the habitat that  surrounds them, Barrett said.
Duke researchers performed a sophisticated mapping and modeling  study with the help of a French botanist to estimate historical and  current distributions of the reddish hardwood, and to support their call  for greater protections and enforcement.
Barrett, whose dissertation research concerns the effects of human  development on lemur health, has seen the illegal logging first-hand.  "When we went there in October, it had become obvious that Madagascar's  tourism had collapsed and that unrestricted logging was accelerating,"  she said. The market for lemur "bush meat" also has increased  dramatically, particularly in the country's northeastern rainforests.
Barrett and Duke Lemur Center director Anne Yoder, who is the senior  author on the policy paper, hope they can call the international  attention of scientists and conservation groups to protect the rosewood  trees. Ideally, this would take the form of increased public pressure on  the Malagasy government to step up enforcement and a formal listing  under the Convention of International Trade in Endangered Species of  Wild Fauna and Flora (CITES), Barrett said.
Brazilian rosewood gained CITES protection in 1992, which is  believed to have put more pressure on the forests in Madagascar.
The slow-growing rosewood trees are found in relative isolation from  each other. They are too dense to float very well, so loggers will fell  several trees along river banks to make skids and rafts for bringing  the logs to market. Once the logs are floated and trucked to Malagasy  ports, they are loaded onto container ships and hauled to China to make  highly prized furniture and musical instruments. There are an estimated  10,000 to 15,000 metric tons of felled rosewood trees awaiting shipment  from Madagascar's ports.
The Malagasy logger who fells the tree is paid about 50 cents for  "backbreaking work," Barrett said. A Chinese rosewood armoire retails  for about $20,000.
Enforcement of the Malagasy government's on-again, off-again policy  against rosewood logging is pretty much nonexistent, Barrett said.  Logging interests have threatened the safety of villages and at least  one park office has been burned down.
"If you protect the trees, you're also protecting habitat," Barrett  said. "Seventy percent of Madagascar's species live in these forests."</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4437</link><pubDate>Fri, 28 May 2010 03:21:50 PDT</pubDate></item><item><title>Small mammals -- and rest of food chain -- at greater risk from global warming than thought</title><description>The balance of biodiversity within North American small-mammal  communities is so out of whack from the last episode of global warming  about 12,000 years ago that the current climate change could push them  past a tipping point, with repercussions up and down the food chain, say  Stanford biologists. The evidence lies in fossils spanning the last  20,000 years that the researchers excavated from a cave in Northern  California.
What they found is that although the small mammals in the area  suffered no extinctions as a result of the warming that occurred at the  end of the Pleistocene epoch, populations of most species nonetheless  experienced a significant loss of numbers while one highly adaptable  species &amp;ndash; the deer mouse &amp;ndash; thrived on the disruptions to the environment  triggered by the changing climate.
"If we only focus on extinction, we are not getting the whole  story," said Jessica Blois, lead author of a paper detailing the study  to be published online by &lt;em&gt;Nature&lt;/em&gt; on May 23. "There was a 30  percent decline in biodiversity due to other types of changes in the  small-mammal community."
The double whammy of late Pleistocene warming, coupled with the  coinciding arrival of humans on the North American continent, took a  well-documented heavy toll on the large animals. Almost a third of the  big, so-called "charismatic" animals &amp;ndash; the ones with the most popular  appeal for humans, such as mammoths and mastodons, dire wolves and  short-faced bears &amp;ndash; went extinct. But until now, little had been done to  explore the effects of that climate shift on smaller fauna.
"We were interested in the small animals because we wanted to know  about the response of the survivors, the communities of animals that are  still on the landscape with us today," said Elizabeth Hadly, professor  of biology and a coauthor of the paper. "We focused not only on the  Pleistocene transition, but also the last 10,000 or so years since  then."
Blois and Hadly excavated deposits in Samwell Cave, in the southern  Cascades foothills. They also sampled the modern small-mammal community  by doing some live trapping in the area of the cave. Blois was a  graduate student in biology when they did the work and Hadly her  adviser. Radiocarbon dating of the samples was done by Jenny McGuire, a  graduate student at the University of California-Berkeley.
The biggest change they saw in the fossil deposits was the manner in  which different small-animal species were spread across the landscape.  "In the Pleistocene, there were about as many gophers as there were  voles as there were deer mice," Hadly said. "But as you move into the  warming event, there is a really rapid reduction in how evenly these  animals are distributed."
Some species became extremely rare, others quite common. And the  species that became king of the landscape &amp;ndash; by virtue of its very  commonness &amp;ndash; was the deer mouse.
"That is a pretty big, somewhat startling result," she said, noting  that deer mice are so common in western landscapes that most people  assume they have virtually always been so. "What these data tell us is  that in the Pleistocene they were not dominant at all."
Prior to this study, Hadly said most researchers would not have  expected species that survived the warming to show any effects. After  all, they survived. "What we are saying is there was a big effect," she  said. And as some species such as deer mice flourished, many other  species declined.
"Local declines of species are the precursor of local extinction,"  said Rodolfo Dirzo, a biology professor at Stanford who was not involved  in the study. Local population declines also imply disruption of the  local ecosystem even without extinctions, he said.
"Small mammals are so common, we often take them for granted," Blois  said. "But they play important roles within ecosystems, in soil  aeration and seed dispersal, for example, and as prey for larger  animals." And different small mammals play those roles differently.
"Deer mice just kind of eat everything, they live everywhere and  they don't operate with the same complexity in an ecosystem that these  other animals take as their roles," said Hadly. She said deer mice are  considered a "weedy" species and, like the plants, don't have a strong  habitat preference &amp;ndash; they are generalists that will move in wherever  there is an opening. When they replace other small-mammal species, the  effects ripple through the ecosystem.
Deer mice don't dig the elaborate deep burrows that gophers do, so  the mice don't aerate soils as effectively. They also don't disperse  seeds the same way as tree squirrels, the consummate hoarders &amp;ndash; and  forgetters &amp;ndash; of seeds; each forgotten cache is another colonization  opportunity for the trees.
Nor do the nocturnal mice feed predators the same way as ground  squirrels or chipmunks, which are active in the daytime. If those  species are supplanted by deer mice, the change can affect the food  supply of hawks and other creatures that feed in the daytime.
"Even though all of the species survived, small-mammal communities  as a whole lost a substantial amount of diversity, which may make them  less resilient to future change," Blois said.
And according to Hadly, an extraordinarily rapid change is looming.
"The temperature change over the next hundred years is expected to  be greater than the temperature that most of the mammals that are on the  landscape have yet witnessed as a species," she said. "The small-mammal  community that we have is really resilient, but it is headed toward a  perturbation that is bigger than anything it has seen in the last  million years."</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4376</link><pubDate>Mon, 24 May 2010 03:14:42 PDT</pubDate></item><item><title>Using remote sensing to track invasive trees</title><description>A team of Agricultural Research Service (ARS) scientists has refined remote sensing tools for identifying invasive  Ashe juniper shrubs and trees in central Texas and nearby regions. These  findings can help rangeland managers determine the extent and severity of Ashe  juniper infestations and boost mitigation efforts.
Over the past century, the expansion of Ashe juniper has reduced the production and diversity of other rangeland plant species. Because Ashe  juniper has little nutritional value for grazing animals, the vegetative shift  has also reduced forage options for livestock and wildlife.
ARS agricultural engineer Chenghai Yang and rangeland scientist James Everitt evaluated remotely sensed  data to pinpoint the most accurate &amp;ldquo;signal&amp;rdquo; for identifying Ashe juniper stands, which often grow within an assortment of other woodland plants.  Yang and Everitt work at the ARS Kika de  la Garza Subtropical Agricultural Research Center in Weslaco,  Texas.......&amp;gt;&lt;a href="http://www.ars.usda.gov/is/pr/2010/100521.htm" target="_blank"&gt; Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4358</link><pubDate>Sat, 22 May 2010 06:07:52 PDT</pubDate></item><item><title>Proteins in unroasted coffee beans may become next-generation insecticides</title><description>Scientists in Brazil are reporting for the first time that coffee  beans contain proteins that can kill insects and might be developed into  new insecticides for protecting food crops against destructive pests.  Their study, which suggests a new use for one of the most important  tropical crops in the world, appears in ACS' &lt;em&gt;Journal of Agricultural  and Food Chemistry&lt;/em&gt;, a bi-weekly publication.
Peas, beans and some other plant seeds contain proteins, called  globulins, which ward off insects. Coffee beans contain large amounts of  globulins, and Paulo Mazzafera and colleagues wondered whether those  coffee proteins might also have an insecticidal effect. The high heat of  roasting destroys globulins, so that they do not appear in brewed  coffee.
Their tests against cowpea weevil larva, insects used as models for  studying the insecticidal activity of proteins, showed that tiny amounts  of the coffee proteins quickly killed up to half of the insects. In the  future, scientists could insert genes for these insect-killing proteins  into important food crops, such as grains, so that plants produce their  own insecticides, the researchers suggest. The proteins appear harmless  to people.</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4338</link><pubDate>Fri, 21 May 2010 04:21:51 PDT</pubDate></item><item><title>New methods developed to detect, measure potato phytonutrients</title><description>Potatoes come in all shapes, sizes and colors-including tubers with  red, yellow, orange and purple flesh. This diversity also applies to  phytonutrients, Agricultural  Research Service (ARS) scientists in Prosser, Wash., are  discovering.
Together with colleagues, they've devised new analytical procedures  for rapidly detecting and measuring phytonutrient concentrations in the  tubers. Phytonutrients are plant compounds that are of particular  interest for their potential to help diminish the risk of cardiovascular  disease, respiratory problems and certain cancers, note Roy  Navarre and Chuck  Brown, geneticists with the ARS Vegetable  and Forage Crop Research Unit in Prosser.
Using the new analytic methods, Navarre and Brown profiled the  phytonutrient contents of several hundred lines of wild and cultivated  potato.  For example, their analysis of phytonutrients known as  phenolics showed concentrations that ranged from 100 to more than 1,500  milligrams per 100 grams dry weight in the potatoes.
One type of phenolic, called chlorogenic acid, is being tested by  university cooperators for its potential to lower blood pressure. Also  of interest are potatoes with high antioxidant activity, which is  credited with helping neutralize cell-damaging molecules in the body  called free radicals. Some potatoes boast antioxidant levels that rival  vegetables such as spinach, Navarre reports.
Read  more about the phytonutrient studies, as well as other potato  research being conducted by ARS scientists at other locations, in the  May/June 2010 issue of &lt;em&gt;Agricultural Research&lt;/em&gt; magazine.
ARS is the principal intramural scientific research agency of the U.S. Department of  Agriculture (USDA). The research also supports the USDA priority of  improving nutrition and health.</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4323</link><pubDate>Thu, 20 May 2010 03:22:32 PDT</pubDate></item><item><title>Protein power for Jack and the beanstalk</title><description>&lt;p style="text-align: justify;"&gt;Plant geneticists are on a determined  quest &amp;mdash; to control auxin, a powerful plant growth hormone. Auxin tells  plants how to grow, where to lay down roots, how to make tissues, and  how to respond to light and gravity. Knowing how to manipulate auxin  could thus have enormous implications for the production of biofuel,  making plants grow faster and better.
&lt;p style="text-align: justify;"&gt;A recent publication in the journal &lt;em&gt;PLoS  Biology&lt;/em&gt; from the laboratory of Prof. Shaul Yalovsky of Tel Aviv University's Molecular  Biology and Ecology of Plants Department describes a  special protein, the ICR1, found to control the way auxin moves  throughout a plant affecting its development. When this protein is  genetically engineered into valuable biofuel crops such as corn,  sugarcane or experimentals like switchgrass, farmers can expect to get a  far larger yield than what they harvest today, Prof. Yalovsky has  found.
&lt;p style="text-align: justify;"&gt;In short, much more biofuel for the  buck.
&lt;p style="text-align: justify;"&gt;"We've found a mechanism that helps the  shoot and root talk to each other," says Prof. Yalovsky. "Somehow both  parts of the plant need to speak to each other to say: 'Hey down there,  I'm up here and there's lots of sun,' or 'I'm down here in the roots and  it's too dry." The plant's shoots need to respond to its environment.  We've discovered the mechanism that helps auxin do its job.".......&amp;gt; F&lt;a href="http://www.aftau.org/site/News2?news_iv_ctrl=-1&amp;amp;page=NewsArticle&amp;amp;id=12237" target="_blank"&gt;ull story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4290</link><pubDate>Tue, 18 May 2010 03:13:44 PDT</pubDate></item><item><title>Growers can boost benefits of broccoli and tomatoes</title><description>A University of Illinois study has demonstrated that agronomic  practices can greatly increase the cancer-preventive phytochemicals in  broccoli and tomatoes.
"We enriched preharvest broccoli with different bioactive  components, then assessed the levels of cancer-fighting enzymes in rats  that ate powders made from these crops," said Elizabeth Jeffery, a U of I  professor of food science and human nutrition.
The highest levels of detoxifying enzymes were found in rats that  ate selenium-treated broccoli. The amount of one of the cancer-fighting  compounds in broccoli was six times higher in selenium-enriched broccoli  than in standard broccoli powder, she said.
Selenium-treated broccoli was also most active in the liver,  reaching a level of bioactivity that exceeded the other foods used in  the experiment.
"We were intrigued to find that selenium initiated this amount of  bioactivity," she said.
Along with garlic and other plants of the allium family, broccoli  and other plants of the brassica family are unique in having a  methylating enzyme that enables plants to store high concentrations of  selenium, she said.
"Our bodies need a certain amount of selenium, but many areas of the  world, including parts of the United States and vast areas of China,  have very little selenium in the soil," she said.
"Not only could selenium in broccoli deliver this necessary mineral,  it also appears to rev up the vegetable's cancer-fighting power," she  added.
Jeffery is now working to determine whether selenium compounds are  directly responsible for the increase in bioactivity or if selenium acts  indirectly by directing new synthesis of the broccoli bioactives called  glucosinolates.
In a previous study, Jeffery and U of I colleague John W. Erdman Jr.  showed that tomato and broccoli powders eaten together are more  effective in slowing prostate cancer in laboratory rats than either  tomato or broccoli alone.
In their current research, they are experimenting with ways to  increase the bioactive components in these foods in order to test the  efficacy of enriched broccoli and tomatoes in a new prostate cancer  study.
Rats were fed diets with food powders containing 10 percent of  either standard broccoli; standard tomato; lycopene-enriched tomato;  tomato enriched with lycopene and other carotenoids; broccoli sprouts,  which contain very high levels of cancer-fighting compounds; or broccoli  grown on soil treated with selenium.
The scientists found that greater amounts of bioactive components in  the food powders translated into increased levels of the compounds in  body tissue and increased bioactivity in the animals.
Carotenoid-enriched tomatoes produced more bioactivity in the liver  than lycopene-enriched or standard tomatoes, yielding the most  cancer-preventive benefits.
"Carotenoids, which are phytochemical pigments found in fruits and  vegetables, are thought to be excellent antioxidants and effective in  cancer prevention," said Ann G. Liu, a U of I graduate student who  worked on the study.
"A good rule is: the brighter the color, the higher the carotenoid  content. If you're growing or buying tomatoes, select plants or produce  that are a very bright red. High-lycopene tomatoes are now available  through garden catalogs," she added.
"This research shows that you can greatly increase a food's  bioactive benefits through normal farming practices, without resorting  to genetic engineering. Farmers have traditionally been more concerned  about yield than nutritional composition. Now we're asking, can we grow  more nutritional broccoli and tomatoes? And the answer is a definite  yes," said Jeffery.</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4277</link><pubDate>Sun, 16 May 2010 04:19:11 PDT</pubDate></item><item><title>Linnaeus 2.0: First E-publication of new plant species</title><description>Four new Neotropical plant species in the hyperdiverse genus &lt;em&gt;Solanum&lt;/em&gt; (&lt;em&gt;Solanaceae&lt;/em&gt;), which includes plants as diverse as the deadly  nightshade as well as the more palatable tomato have been published in  the open access online-only journal &lt;em&gt;PLoS ONE&lt;/em&gt; by Dr. Sandra Knapp  of the Natural History Museum, London. Although several thousand new  plant species are described each year, this paper represents a botanical  pioneer: it is the first to be published in an online-only journal  whilst adhering to the strict botanical code that sets out how new  species can be named.
The naming of new taxa in plants is governed by the International  Code of Botanical Nomenclature (ICBN), which has traditionally been  thought to not allow publication of new names in anything other than  print on paper. This article provides a solution to this conundrum by  separating the printing process from the publisher and enabling the  author to print their own copies and distribute them to relevant museums  and institutions on the day of publication. As such, it is the first to  effectively publish new plant names in an online-only journal while  complying with the rules and recommendations of the ICBN. Because &lt;em&gt;PLoS  ONE&lt;/em&gt; is also an open-access journal, the article and the associated  guidelines are freely available for the community to download and use as  the 'type-specimen' for such a publication.
Dr Knapp is a leading plant taxonomist, author of numerous books and  a world authority on &lt;em&gt;Solanaceae&lt;/em&gt;, the nightshade family which  includes potatoes and tomatoes.  She is well acquainted with the Codes  of Nomenclature, of which the ICBN is one (the others govern cultivated  plant, animals and bacterial names).......&amp;gt;&lt;a href="http://www.sciencedaily.com/releases/2010/05/100505173008.htm" target="_blank"&gt; Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=4125</link><pubDate>Thu, 06 May 2010 03:43:19 PDT</pubDate></item><item><title>How Grass Buffers Keep Agricultural Herbicides at Bay</title><description>2010-Grass buffer strips are commonly used in  crop production to reduce herbicide runoff. These practices are  encouraged through incentives, regulations or laws, and are effective at  lowering herbicide concentration in runoff. However, subsurface  filtration&lt;span style="line-height: 115%;"&gt; (under the buffer strips) &lt;/span&gt;is  not as well documented, and neither are the effects of trees integrated  into buffer strips with grasses. Understanding these effects is crucial  as agriculture producers continue to adopt these strategies.
&lt;div style="margin: 0in 0in 10pt;"&gt;&lt;span style="line-height: 115%;"&gt;Researchers  studied the impact of grass and grass/tree buffer strips on three  herbicides commonly used in agriculture. The scientists studied the  transport of the herbicides in both surface runoff and subsurface  infiltration during two growing seasons. &lt;/span&gt;&lt;/div&gt;
&lt;div style="margin: 0in 0in 10pt;"&gt;&lt;span style="line-height: 115%;"&gt;Vegetative  barriers reduce herbicide concentrations in runoff, but movement of  herbicides through subsurface filtration actually increased. Total  export of herbicides was reduced through the use of grass and grass/tree  barriers. The research was conducted by &lt;/span&gt;&lt;span style="line-height: 115%;"&gt;Emmanuelle Caron, Pierre Lafrance,  Jean-Christian Auclair of the &lt;/span&gt;&lt;span style="line-height: 115%;"&gt;University  of Quebec&lt;/span&gt;&lt;span style="line-height: 115%;"&gt;, and Marc Duchemin of  the Institute of Research and Development in Agri-Environment&lt;/span&gt;&lt;span style="line-height: 115%;"&gt;.&lt;/span&gt;&lt;/div&gt;
&lt;div style="margin: 0in 0in 10pt;"&gt;&lt;span style="line-height: 115%;"&gt;The  results are reported in the March/April 2010 edition of the &lt;em&gt;Journal  of Environmental Quality&lt;/em&gt;, published by the American Society of  Agronomy, the Crop Soil Science Society of America, and the Soil Science  Society of America.......&lt;a href="https://www.agronomy.org/news-media/releases/2010/0426/350/" target="_blank"&gt;Read more&lt;/a&gt;&lt;br /&gt;&lt;/span&gt;&lt;/div&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3995</link><pubDate>Tue, 27 Apr 2010 03:51:51 PDT</pubDate></item><item><title>Micro-RNA Can Move, New Evidence in Plants Shows</title><description>&lt;span class="newsitembody"&gt; &lt;/span&gt;
&lt;span class="newsitembody"&gt;&lt;span&gt;Ever since  tiny bits of genetic material known as microRNA were first characterized  in the early 1990s, scientists have been discovering just how important  they are to regulating the activity of genes within cells. A new study now shows that microRNAs don't  just control the activity of genes within a given cell, they also can  move from one cell to another to send signals that influence gene  expression on a broader scale.&lt;/span&gt;&lt;/span&gt;&lt;span&gt; Researchers at the Duke Institute for  Genome Sciences &amp;amp; Policy (IGSP), in collaboration with groups at the  Universities of Helsinki and Uppsala and the Boyce Thompson Institute  for Plant Research at Cornell University, made the discovery while  working out the intricate details of plant root development in &lt;em&gt;Arabidopsis&lt;/em&gt;,  a highly-studied mustard plant. Although they still don't know exactly  how the microRNAs travel, it appears that this mobility allows them to  play an important developmental role in sharpening the boundaries that  define one plant tissue from another.&lt;/span&gt;&lt;span class="newsitembody"&gt;&lt;span&gt; "To our knowledge, this is the first solid  evidence that microRNAs can move from one cell to another," said Philip  Benfey, director of the Duke IGSP Center for Systems Biology.......&amp;gt; &lt;a href="http://news.duke.edu/2010/04/MicroRNA.html" target="_blank"&gt;Full story&lt;/a&gt;&lt;br /&gt;&lt;/span&gt;&lt;/span&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3965</link><pubDate>Sun, 25 Apr 2010 04:41:20 PDT</pubDate></item><item><title>Plant growth aided by insect-feeding animals</title><description>Add insect-feeding birds, bats and lizards to the front lines of the battle  against global climate change.&lt;br /&gt;&lt;br /&gt;Summarizing the results of more than 100  experiments conducted on four continents, UC Irvine ecologist Kailen A. Mooney  and colleagues found that these insect-gobbling animals increase plant growth by  reducing the abundance of plant-feeding insects and the damage they do to the  plant life that helps mitigate global warming.
Our efforts solidify the importance of birds, bats, lizards and other similar  animals to ecosystem health, and underscores the importance of conserving these  species in the face of global change,&amp;rdquo; said Mooney, an assistant professor in  ecology and evolutionary biology.
The results come at a time when the importance of birds and other  insectivores as plant protectors has come into doubt, Mooney added. Studies on  bird, bat and lizard diets show they devour both plant-feeding insects and the  spiders and other insect predators that eat plant feeders. &amp;nbsp;
Recognizing these complex feeding relationships, Mooney said it had become  unclear whether animals like birds reduce plant-feeding insect populations, or  whether they might in fact be protecting them from spiders and the like.......&amp;gt; &lt;a href="http://today.uci.edu/news/2010/04/nr_Insects_100407.php" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3738</link><pubDate>Thu, 08 Apr 2010 03:29:02 PDT</pubDate></item><item><title>Genetic key discovered to dramatically increase yields and improve taste of hybrid tomato plants</title><description>Spectacularly increased yields and improved taste have been achieved  with hybrid tomato plants by researchers at the Robert H. Smith Faculty  of Agriculture, Food and Environment at the Hebrew University and the  Cold Spring Harbor Laboratory (CSHL), New York.
The researchers have discovered the yield-boosting power of a  single gene, which controls when plants make flowers and that works in  different varieties of tomato and, crucially, across a range of  environmental conditions. The discovery was patented by Yissum, the  technology transfer arm of the Hebrew University, which is seeking  potential partners for further development and commercialization.
"This discovery has tremendous potential to transform both the  billion-dollar tomato industry, as well as agricultural practices  designed to get the most yield from other flowering crops," says CSHL's  Dr. Zach Lippman, one of the three authors of the study, which appears  in the magazine &lt;em&gt;Nature Genetics&lt;/em&gt; online . The study is co-authored  by Dr. Uri Krieger and Prof. Dani Zamir of the Hebrew University.......&amp;gt; &lt;a href="http://www.sciencecodex.com/genetic_key_discovered_to_dramatically_increase_yields_and_improve_taste_of_hybrid_tomato_plants" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3723</link><pubDate>Wed, 07 Apr 2010 03:31:13 PDT</pubDate></item><item><title>Doubled haploid technology for quickly developing inbred corn lines offered at ISU</title><description>Agronomists at Iowa State University are offering     doubled haploid technology that allows corn breeders to more     quickly produce inbred lines for research or private use. Thomas L&amp;uuml;bberstedt, associate professor and K.J. Frey     chair in agronomy and director of the R.F. Baker Center for     Plant Breeding, has launched a Doubled Haploid Facility at ISU     that can develop pure, inbred corn lines in less time than     traditional methods. Inbred corn lines have two copies of the same genome. They are     sometimes called pure lines, because after self-pollination     (same plant is both male and female) all offspring are     identical to the parent plant. They are an exact replica of the     single parent and are valuable for research or commercial use. These homozygous plants have two identical copies per gene,     while heterozygous plants, such as hybrids, frequently have two     different copies per gene.......&amp;gt; &lt;a href="http://www.news.iastate.edu/news/2010/apr/doubledhaploid" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3702</link><pubDate>Tue, 06 Apr 2010 03:19:38 PDT</pubDate></item><item><title>Longer-lasting flowers: Fresh ideas from ARS researchers</title><description>Tomorrow's fragrant bouquets and colorful potted plants might last longer, thanks to floriculture  research by Agricultural Research Service (ARS) plant physiologist Cai-Zhong Jiang. His investigations might help boost the vase life of favorite  cut flowers and shelf life of prized potted plants. Jiang is with the ARS Crops Pathology  and Genetics Research Unit at Davis, Calif. He's collaborating with researchers from the University  of California-Davis (UCD) and elsewhere. In ongoing studies, Jiang, UCD colleague Michael S. Reid and  co-researchers have shown that spraying low concentrations of a compound known as  thidiazuron (TDZ) has significant, sometimes spectacular effects in extending the  life of potted plants' leaves and flowers. For example, in tests with  greenhouse-grown cyclamen plants, TDZ-treated plants had a significantly longer life than  did unsprayed plants, according to Jiang. Leaves of TDZ-treated cyclamen  plants took longer to yellow and fall off than those of untreated plants.......&amp;gt; &lt;a href="http://www.ars.usda.gov/is/pr/2010/100402.htm" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3674</link><pubDate>Sat, 03 Apr 2010 03:43:50 PDT</pubDate></item><item><title>Biologists discover an on/off button on plants' alarm system</title><description>Plants respond to attacks by herbivores or pathogens by activating  defense programs that drive off or even kill the attackers. These  defense responses require a great deal of the plant's energy and  reserves, which would otherwise be invested in growth and reproduction.  So, it's very important to strictly control the activity of defense  genes. Hormones, such as the jasmonates, are crucial in this process &amp;ndash;  and the plant produces these hormones when subjected to stress  conditions. The presence of the jasmonates sets a complex chain reaction in  motion, starting with the degradation of the so-called JAZ proteins.  This in turn frees up another protein (MYC2), which is the signal for  launching the genetic defense programs and stopping the plant's growth.  The presence of the JAZ proteins keeps the defense mechanism 'turned  off'. Until now, it has been unclear how the JAZ proteins are able to  block the MYC2 protein's activity.......&amp;gt; &lt;a href="http://www.vib.be/NR/rdonlyres/02CE3C9E-C278-486C-981F-4D5742148427/3049/20100401_ENG_Goossens_Ninja_web.pdf" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3660</link><pubDate>Fri, 02 Apr 2010 04:52:05 PDT</pubDate></item><item><title>Peach DNA unraveled: Clemson University plays major role</title><description>As peach trees go, it doesn&amp;rsquo;t look much different from its kin at the  Clemson University Musser Fruit Research Farm, but appearances can be  deceiving. This one, a Lovell variety, has a unique genetic  characteristic that made it a standout in the orchard. Its DNA &amp;mdash; its  genetic set of instructions for living &amp;mdash; has been sequenced by  scientists, enabling further research to identify beneficial traits to  grow better trees and fruit. The tree&amp;rsquo;s DNA sequence is being published worldwide April 1, opening  a new era in fruit-tree research that could have far-reaching  implications for the future of peaches, as well as many other valuable  plants. The research is available online at http://www.peachgenome.org. This genome sequence is the culmination of an extensive research  program pioneered at Clemson University under the leadership of Albert  &amp;ldquo;Bert&amp;rdquo; Abbott, who holds the Robert and Lois Coker Trustees Chair in  Molecular Genetics and is a professor in the genetics and biochemistry  department. The research goal is to establish the peach as a model tree  genome for identifying and understanding genes that are critical for  deciduous tree growth and development.......&amp;gt; &lt;a href="http://www.clemson.edu/media-relations/article.php?article_id=2686" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3655</link><pubDate>Fri, 02 Apr 2010 04:37:07 PDT</pubDate></item><item><title>Proteins in unroasted coffee beans may become next-generation insecticides</title><description>Scientists in Brazil are reporting for the first time that coffee  beans contain proteins that can kill insects and might be developed into  new insecticides for protecting food crops against destructive pests.  Their study, which suggests a new use for one of the most important  tropical crops in the world, appears in ACS' &lt;em&gt;Journal of Agricultural  and Food Chemistry&lt;/em&gt;, a bi-weekly publication. Peas, beans and some other plant seeds contain proteins, called  globulins, which ward off insects. Coffee beans contain large amounts of  globulins, and Paulo Mazzafera and colleagues wondered whether those  coffee proteins might also have an insecticidal effect. The high heat of  roasting destroys globulins, so that they do not appear in brewed  coffee.......&amp;gt; &lt;a href="http://www.eurekalert.org/pub_releases/2010-03/acs-piu033110.php" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3639</link><pubDate>Thu, 01 Apr 2010 03:33:35 PDT</pubDate></item><item><title>Model predicts shifts in carbon absorption by forest canopies</title><description>An Agricultural Research Service (ARS) scientist participated in a  project to fine-tune computer models that can indicate when forest  "carbon sinks" become net carbon generators instead.  The results will  help pinpoint the effectiveness of trees in offsetting carbon releases  that contribute to higher atmospheric temperatures and global climate  change. ARS plant physiologist Erik Hamerlynck teamed up with Rutgers  University biologist Karina Schafer and U.S. Forest Service colleagues  Kenneth Clark and Nicholas Skowronski to calibrate the Canopy  Conductance Constrained Carbon Assimilation (4C-A) model, a computer  program that generates carbon balance estimates for tree canopies.  Hamerlynck works at the ARS Southwest Watershed Research Center in  Tucson, Ariz. In the summer of 2006, the team measured tree sap flow and  leaf-level photosynthetic gas exchange at different canopy levels in a  stand of oaks and pines in the New Jersey Pine Barrens. These data were  used to calibrate the 4C-A  model to simulate the amount of carbon the  tree canopy absorbs and releases into the atmosphere via photosynthesis  and respiration.......&amp;gt; &lt;a href="http://www.ars.usda.gov/is/pr/2010/100331.htm" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3638</link><pubDate>Thu, 01 Apr 2010 03:28:52 PDT</pubDate></item><item><title>Second plant pathway could improve nutrition, biofuel production</title><description>&lt;p class="FORMAT-BODY"&gt;Purdue University scientists have defined a  hidden second option plants have for making an essential amino acid that  could be the first step in boosting plants' nutritional value and  improving biofuel production potential. The amino acid phenylalanine is required to build  proteins and is a precursor for more than 8,000 other compounds  essential to plants, including lignin, which allows plants to stand  upright but acts as a barrier in the production of cellulosic ethanol. It had been believed that plants could use two  pathways to create phenylalanine. Natalia Dudareva, a professor of  horticulture, and Hiroshi Maeda, a postdoctoral researcher in Dudareva's  laboratory, have confirmed that while plants predominantly use one  pathway, they have another at their disposal. The existence of this  second pathway might one day allow scientists to increase a plant's  production of the essential amino acid. Their research was published in  the early online version of the journal &lt;em&gt;Plant Cell&lt;/em&gt;.......&amp;gt; &lt;a href="http://www.purdue.edu/newsroom/research/2010/100331DudarevaPhenlylalan.html" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3637</link><pubDate>Thu, 01 Apr 2010 03:24:56 PDT</pubDate></item><item><title>Fabled 'vegetable lamb' plant contains potential treatment for osteoporosis</title><description>The "vegetable lamb" plant &amp;mdash; once believed to bear fruit that ripened  into a living baby sheep &amp;mdash; produces substances that show promise in  laboratory experiments as new treatments for osteoporosis, the  bone-thinning disease. That's the conclusion of a new study in ACS'  monthly &lt;em&gt;Journal of Natural Products&lt;/em&gt;. Young Ho Kim and colleagues point out that osteoporosis is a global  health problem, affecting up to 6 million women and 2 million men in the  United States alone. Doctors know that the secret to strong bones  involves a delicate balance between two types of bone cells:  Osteoblasts, which build up bone, and osteoclasts, which break down  bone. Seeking potential medications that might tip the balance in favor of  bone building, the researchers turned to the "vegetable lamb" plant as  part of a larger study plants used in folk medicine in Vietnam.......&amp;gt; &lt;a href="http://portal.acs.org/portal/acs/corg/content?_nfpb=true&amp;amp;_pageLabel=PP_ARTICLEMAIN&amp;amp;node_id=223&amp;amp;content_id=CNBP_023201&amp;amp;use_sec=true&amp;amp;sec_url_var=region1&amp;amp;__uuid=6d200bd7-cf7c-4f1f-8ab9-ee121e711642#P45_1926" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3636</link><pubDate>Thu, 01 Apr 2010 03:22:42 PDT</pubDate></item><item><title>The forests of the Basque Autonomous Community are progressing</title><description>Ecosystems are essential for preserving the quality of life of human  beings, and society should be aware of this, according to Ms Miren  Onaindia, biologist and person responsible for the Forest Ecology and  Natural Resources research team at the University of the Basque Country  (UPV/EHU). This group has been investigating the woods and forest of the  Autonomous Community of the Basque Country (CAV-EAE) for twenty years  now. In recent times they have focused on evaluating the situation of  ecosystems, concentrating on biodiversity. &amp;ldquo;If trees are healthy then the mountains are protected. The soil  maintains itself in a good state and this protects from erosion, in case  of floods&amp;rdquo;. With this simple example, Ms Onaindia explained why it is  so important that society as a whole maintains ecosystems in an optimum  state. Ms Onaindia and six other members of the Department of Plant Biology and  Ecology make up this working group devoted to examining forests,  currently focused on evaluating the ecosystems of the CAV-EAE. With this  goal, they analyse plants indicative of the biodiversity and the  internal structure in each forest investigated. &amp;ldquo;Some species have the  ability to indicate that a forest is in a good state and other, on the  other hand, that the woodland is degrading&amp;rdquo;, explained Ms Onaindia.......&amp;gt; &lt;a href="http://www.basqueresearch.com/berria_irakurri.asp?Berri_Kod=2645&amp;amp;hizk=I" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3605</link><pubDate>Tue, 30 Mar 2010 03:37:06 PDT</pubDate></item><item><title>Single gene dramatically boosts yield, sweetness in tomato hybrids, CSHL-Israeli study finds</title><description>Giving tomato breeders and ketchup fans something to cheer about, a  Cold Spring Harbor Laboratory (CSHL) scientist and his colleagues at the  Hebrew University in Israel have identified a gene that pushes hybrid  tomato plants to spectacularly increase yield. The yield-boosting power  of this gene, which controls when plants make flowers, works in  different varieties of tomato, and crucially, across a range of  environmental conditions. "This discovery has potential to have a significant impact on both  the billion-dollar tomato industry, as well as agricultural practices  designed to get the most yield from other flowering crops," says CSHL's  Zach Lippman, Ph.D., one of the three authors on the study, which  appears in the journal Nature Genetics online on March 28th. The study  is co-authored by Israeli scientists Uri Krieger and Professor Dani  Zamir. The team made the discovery while hunting for genes that boost  hybrid vigor, a revolutionary breeding principle that spurred the  production of blockbuster hybrid crops like corn and rice a century ago.  Hybrid vigor, also known as heterosis, is the miraculous phenomenon by  which intercrossing two varieties of plants produces more vigorous  hybrid offspring with higher yields. First observed by Charles Darwin in  1876, heterosis was rediscovered by CSHL corn geneticist George Shull  30 years later, but how heterosis works has remained a mystery........&amp;gt; &lt;a href="http://www.sciencedaily.com/releases/2010/03/100328170239.htm" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3592</link><pubDate>Mon, 29 Mar 2010 03:34:36 PDT</pubDate></item><item><title>Fast plant growth or pest defense, but not both</title><description>There's a war occurring each day in our backyards &amp;mdash; plant versus  plant-eating insect versus insect-eating insect. Research by UC Irvine's  Kailen Mooney suggests the outcome &amp;mdash; of interest to farmers &amp;mdash; is a  stalemate. For a study published online Friday (March 26) in the journal Science,  Mooney and colleagues studied 16 species of milkweed, a group of  flowering plants found throughout the Western hemisphere. The scientists sought to determine the relationship among plant growth,  how plants defend themselves against plant-eaters (with thorns and  toxins, for example) and the protection plants receive from predators  such as ladybugs that eat plant-hungry insects. The herbivores &amp;mdash; in this  case bright yellow aphids &amp;mdash; damage plants; ladybugs can act as  bodyguards, helping plants by eating aphids. The researchers asked: Can plants have it all? Can they grow quickly and  defend themselves against herbivores while at the same time solicit  protection from ladybugs and other bodyguards?......&amp;gt; &lt;a href="http://www.universityofcalifornia.edu/news/article/23082" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3560</link><pubDate>Fri, 26 Mar 2010 03:46:59 PDT</pubDate></item><item><title>Chance discovery leads to plant breeding breakthrough</title><description>A reliable method for producing plants that carry genetic material  from only one of their parents has been discovered by plant biologists  at UC Davis. The technique, to be published March 25 in the journal &lt;em&gt;Nature,&lt;/em&gt; could dramatically speed up the breeding of crop plants for desirable  traits.The discovery came out of a chance observation in the lab that could  easily have been written off as an error. "We were doing completely 'blue skies' research, and we discovered  something that is immediately useful," said Simon Chan, assistant  professor of plant biology at UC Davis and co-author on the paper. Like most organisms that reproduce through sex, plants have paired  chromosomes, with each parent contributing one chromosome to each pair.  Plants and animals with paired chromosomes are called diploid. Their  eggs and sperm are haploid, containing only one chromosome from each  pair.......&amp;gt; &lt;a href="http://www.news.ucdavis.edu/search/news_detail.lasso?id=9425" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3545</link><pubDate>Thu, 25 Mar 2010 03:51:54 PDT</pubDate></item><item><title>Global warming threatens plant diversity</title><description>In the coming decades, climate change is set to produce worldwide  changes in the living conditions for plants, whereby major regional  differences may be expected to occur. Thus today&amp;acute;s cool, moist regions  could in future provide habitats for additional species, and in arid and  hot regions the climatic prerequisites for a high degree of plant  diversity will deteriorate. This is the conclusion reached in a new  study by scientists at the Universities of Bonn, G&amp;ouml;ttingen and Yale, and  published in the &lt;em&gt;Proceedings of the Royal Society&lt;/em&gt; London. The  study was funded by the Academy of Sciences and Literature Mainz and the  German Federal Ministry for Education and Research (BMBF). Dr. Jan Henning Sommer of Bonn University&amp;acute;s Nees Institute for  Biodiversity of Plants asserts, "climate change could bring great  confusion to the existing pattern of plant diversity, with scarcely  predictable consequences for our ecosystems and mankind". The potential  impact of climate change on global plant diversity has now, for the  first time, been quantified and modeled on a regional basis.......&amp;gt; &lt;a href="http://www.sciencecodex.com/global_warming_threatens_plant_diversity" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3527</link><pubDate>Wed, 24 Mar 2010 03:43:51 PDT</pubDate></item><item><title>Bringing better grapes a step closer to reality</title><description>Grapes are one of the world's most economically important fruit  crops, but the woody perennial takes three years to go from seed to  fruit, and that makes traditional breeding expensive and time-consuming. A team of Agricultural Research Service (ARS) researchers has found a  way to speed things up by developing a way to identify genetic markers  in the grapevine's genome that can be linked with specific traits, such  as fruit quality, environmental adaptation, and disease and pest  resistance. Computational biologist Doreen Ware, geneticists Edward Buckler and  Charles Simon, and research leader Gan-Yuan Zhong have developed a  relatively fast and inexpensive way to identify genetic markers not only  in grapes, but also in other crops by using modern sequencing  approaches. Ware and Buckler work at the ARS Robert W. Holley Center for  Agriculture and Health in Ithaca, N.Y.; Simon works at the ARS Plant  Genetic Resources Unit at Geneva, N.Y., and Zhong is at the ARS Grape  Genetics Research Unit, also at Geneva.......&amp;gt; &lt;a href="http://www.ars.usda.gov/is/pr/2010/100323.htm?pf=1" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3524</link><pubDate>Wed, 24 Mar 2010 03:32:54 PDT</pubDate></item><item><title>A sweet problem: Princeton researchers find that high-fructose corn syrup prompts considerably more weight gain</title><description>A Princeton University research team has demonstrated that all  sweeteners are not equal when it comes to weight gain: Rats with access  to high-fructose corn syrup gained significantly more weight than those  with access to table sugar, even when their overall caloric intake was  the same. In addition to causing significant weight gain in lab animals, long-term  consumption of high-fructose corn syrup also led to abnormal increases  in body fat, especially in the abdomen, and a rise in circulating blood  fats called triglycerides. The researchers say the work sheds light on  the factors contributing to obesity trends in the United States. "Some people have claimed that high-fructose corn syrup is no different  than other sweeteners when it comes to weight gain and obesity, but our  results make it clear that this just isn't true, at least under the  conditions of our tests," said psychology professor Bart  Hoebel, who specializes in the neuroscience of appetite, weight and  sugar addiction. "When rats are drinking high-fructose corn syrup at  levels well below those in soda pop, they're becoming obese -- every  single one, across the board. Even when rats are fed a high-fat diet,  you don't see this; they don't all gain extra weight.".......&amp;gt; &lt;span style="color: #0000ff;"&gt;&lt;a href="http://www.princeton.edu/main/news/archive/S26/91/22K07/" target="_blank"&gt;Full story&lt;/a&gt;&lt;/span&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3504</link><pubDate>Tue, 23 Mar 2010 03:18:47 PDT</pubDate></item><item><title>URI pharmacy researcher finds beneficial compounds in pure maple syrup</title><description>Before you dig in to your next stack of French toast or waffles, you  might want to pour on pure maple syrup. That's because University of Rhode Island researcher Navindra  Seeram, who specializes in medicinal plant research, has found more than  20 compounds in maple syrup from Canada that have been linked to human  health, 13 of which are newly discovered in maple syrup. In addition,  eight of the compounds have been found in the Acer (maple) family for  the first time. The URI assistant professor of biomedical and pharmaceutical  sciences in URI's College of Pharmacy presented his findings Sunday,  March 21 at the American Chemical Society's Annual Meeting in San  Francisco. The project was made possible by Conseil pour le  d&amp;eacute;veloppement de l'agriculture du Qu&amp;eacute;bec (CDAQ), with funding provided  by Agriculture and Agri-Food Canada's Advancing Canadian Agriculture and  Agri-Food (ACAAF) program.......&amp;gt; &lt;a href="http://www.scienceblog.com/cms/uri-pharmacy-researcher-finds-beneficial-compounds-pure-maple-syrup.html?utm_source=feedburner&amp;amp;utm_medium=feed&amp;amp;utm_campaign=Feed%3A+scienceblogrssfeed+%28Science+Blog%29" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3495</link><pubDate>Mon, 22 Mar 2010 03:29:16 PDT</pubDate></item><item><title>Microscopic photography reveals bacteria destroying cell wall in wine grape vines</title><description>Like a band of detectives surveying the movement of a criminal,  researchers using photographic technology have caught at least one  culprit in the act. In this case, electron microscopy was used to watch a deadly  bacteria breakdown cell walls in wine grape plants &amp;ndash; an image that  previously had not been witnessed. The study will be published in &lt;em&gt;Botany&lt;/em&gt;. "Basically, we've been interested in determining how the bacteria  moves," said Dr. B. Greg Cobb, Texas AgriLife Research plant  physiologist in College Station. "How do they go from one part of the  plant to another?" The death of wine grape plants from Pierce's Disease is a serious  threat to wineries from Texas to California, Cobb noted, and no one has  been able to stop or reverse the effects of the bacteria that is  injected into the vines by an insect known as the glassy-winged  sharpshooter.......&amp;gt;&lt;a href="http://agnews.tamu.edu/showstory.php?id=1807" target="_blank"&gt; &lt;span style="color: #0000ff;"&gt;Full story&lt;/span&gt;&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3417</link><pubDate>Tue, 16 Mar 2010 03:23:49 PDT</pubDate></item><item><title>New defenses deployed against plant diseases</title><description>An international team led by scientists at the Sainsbury Laboratory in Norwich,UK, have transferred broad spectrum resistance against some important plant diseases across different plant families. This breakthrough provides a new way to produce crops with sustainable resistance to economically important diseases. Food insecurity is driving the search for ways to increase the amount of food we grow, whilst at the same time reducing unsustainable agricultural inputs. One way to do this is to increase the innate ability of crops to fight off disease-causing pathogens. Increased disease resistance would reduce yield losses as well as reduce the need for pesticide spraying.......&amp;gt; &lt;a href="http://www.sciencedaily.com/releases/2010/03/100314150912.htm" target="_blank"&gt;&lt;span style="color: #0000ff;"&gt;Full story&lt;/span&gt;&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3409</link><pubDate>Mon, 15 Mar 2010 03:51:45 PDT</pubDate></item><item><title>Plant hormone increases cotton yields in drought conditions</title><description>A naturally occurring class of plant hormones called cytokinins has been found to help increase cotton yields during drought conditions, according to Agricultural Research Service (ARS) scientists. Cytokinins promote cell division and growth in plants. In cotton, cytokinins stimulate the growth of the main plant stem and branches. Commercially produced cytokinins are routinely applied in apple and pistachio orchards to promote fruit growth. John Burke, director of the ARS Cropping Systems Research Laboratory in Lubbock, Texas, found that applying cytokinins to cotton crops can increase yields in water-limited environments with reduced irrigation or no irrigation. Burke was granted a patent for his discovery.......&amp;gt; &lt;a href="http://www.ars.usda.gov/is/pr/2010/100310.htm" target="_blank"&gt;&lt;span style="color: #0000ff;"&gt;Full story&lt;/span&gt;&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3336</link><pubDate>Thu, 11 Mar 2010 03:31:36 PDT</pubDate></item><item><title>Asexual plant reproduction may seed new approach for agriculture</title><description>Farmers throughout the world spend an estimated $36 billion a year to buy seeds for crops, especially those with sought after traits such as hardiness and pest-resistance. They can't grow these seeds themselves because the very act of sexual reproduction erases many of those carefully selected traits. So year after year, farmers must purchase new supplies of specially-produced seeds. This problem is sidestepped by some plants&amp;mdash;such as dandelions and poplar trees&amp;mdash;that reproduce asexually by essentially cloning themselves. Jean-Philippe Vielle-Calzada, a Howard Hughes Medical Institute (HHMI) international research scholar, wondered whether he could learn enough about the genetics of asexual reproduction to apply it to plants that produce sexually. In an advance online publication in &lt;em&gt;Nature&lt;/em&gt; on March 7, 2010, Vielle-Calzada and his colleagues report that they have moved a step closer to turning sexually-reproducing plants into asexual reproducers, a finding that could have profound implications for agriculture........&amp;gt; &lt;a href="http://www.hhmi.org/news/viellecalzada20100307.html" target="_blank"&gt;&lt;span style="color: #0000ff;"&gt;Full story&lt;/span&gt;&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3301</link><pubDate>Tue, 09 Mar 2010 03:27:00 PDT</pubDate></item><item><title>Study shows woody plant encroachment has increased stream flow in the Edwards Plateau</title><description>A new study by Texas AgriLife Research scientists finds that contrary to widespread perceptions, springs in the Edwards Plateau, which provide much of the stream flows, have not been declining as a result of increased encroachment of woody plants. In fact, spring flows are twice as high as they were prior to 1950.&amp;nbsp;The study found that the landscape is actually recovering from intensive livestock grazing in Texas that dates back to the late 1800s. Large numbers of cattle, sheep and goats continuously grazing rangelands led to widespread soil degradation, partly hindering the amount of water recharging springs and groundwater, said Dr. Bradford Wilcox, a professor in the Department of Ecosystems Science and Management at Texas A&amp;amp;M University and one of the authors of the study, which is to be published in the journal Geophysical Research Letters, a publication of the American Geophysical Union.......&amp;gt; &lt;a href="http://agnews.tamu.edu/showstory.php?id=1790" target="_blank"&gt;&lt;span style="color: #0000ff;"&gt;Full story&lt;/span&gt;&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3253</link><pubDate>Fri, 05 Mar 2010 03:44:33 PDT</pubDate></item><item><title>A new energy source from the common pea</title><description>&lt;p style="text-align: justify;"&gt;If harnessing the unlimited solar power of the sun were easy, we wouldn't still have the greenhouse gas problem that results from the use of fossil fuel. And while solar energy systems work moderately well in hot desert climates, they are still inefficient and contribute only a small percentage of the general energy demand. A new solution may be coming from an unexpected source &amp;mdash; a source that may be on your dinner plate tonight. "Looking at the most complicated membrane structure found in a plant, we deciphered a complex membrane protein structure which is the core of our new proposed model for developing 'green' energy," says structural biologist Prof. Nathan Nelson of Tel Aviv University's Department of Biochemistry. Isolating the minute crystals of the PSI super complex from the pea plant, Prof. Nelson suggests these crystals can be illuminated and used as small battery chargers or form the core of more efficient man-made solar cells........&amp;gt; &lt;a href="http://www.aftau.org/site/News2?page=NewsArticle&amp;amp;id=11819" target="_blank"&gt;Full story&lt;/a&gt;</description><link>http://www.labslink.com/ViewResearchNews.aspx?id=3252</link><pubDate>Fri, 05 Mar 2010 03:41:21 PDT</pubDate></item></channel></rss>